Comparative Genomic Analysis of Biofilm-Forming Polar Microbacterium sp. Strains PAMC22086 and PAMC21962 Isolated from Extreme Habitats

نویسندگان

چکیده

The members of Microbacterium isolated from different environments are known to form peptidoglycan. In this study, we compared the biofilm-forming abilities sp. PAMC22086 (PAMC22086), which was soil in South Shetland Islands and PAMC21962 (PAMC21962), algae Islands. analysis average nucleotide identity phylogeny revealed a 97% similarity oxydans VIU2A, while showed 99.1% hominis SGAir0570. For comparative genomic PAMC21962, genes related biofilm formation were identified using EggNOG KEGG pathway databases. possessed by both cpdA, phnB, rhlC, glgC, regulate virulence, formation, multicellular structure. Among indirectly involved unlike csrA, glgB, responsible for attachment glycogen biosynthesis. Additionally, PAMC22086, additional functional rsmA, is mobility polysaccharide production, dksA, GTPase, oxyR, play roles cell cycle stress response, identified. addition, ability two isolates examined vivo standard crystal violet staining technique, morphological differences investigated. It evident distribution biofilm-associated between strains that bacteria can survive niches employing distinct strategies. Both exhibit morphologies. forms attaches side, indicates growth starting center. formation-related not well understood. However, it has been observed species regardless number they possess. Through comparison species, specific core adhesion, plays crucial role formation. This study provides comprehensive profile genus’s features preliminary understanding genus, laying foundation further research.

برای دانلود باید عضویت طلایی داشته باشید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Comparative genomic analysis between Corynebacterium pseudotuberculosis strains isolated from buffalo

Corynebacterium pseudotuberculosis is a Gram-positive, pleomorphic, facultative intracellular pathogen that causes Oedematous Skin Disease (OSD) in buffalo. To better understand the pathogenic mechanisms of OSD, we performed a comparative genomic analysis of 11 strains of C. pseudotuberculosis isolated from different buffalo found to be infected in Egypt during an outbreak that occurred in 2008...

متن کامل

Microbacterium kribbense sp. nov., isolated from soil.

A Gram-positive, short, rod-shaped, cream-coloured actinobacterium, designated MSL-04(T), was isolated from a soil sample collected from an agricultural field on Bigeum Island (Republic of Korea) and was subjected to polyphasic characterization to unravel its taxonomic position. The optimum growth temperature and pH were 28-30 degrees C and pH 7.2-7.4. Chemotaxonomic characteristics such as B2b...

متن کامل

Genomic diversity of Clostridium perfringens strains isolated from food and human sources

Clostridium perfringens is a serious pathogen which causes enteric diseases in domestic animals and food poisoning in humans. Spores can survive cooking processes and play an important role in the possible onset of disease. In this study, RAPD-PCR and REPPCR were used to examine the genetic diversity of 49 isolates of C. perfringens type A from three different sources. The results of RAPD-PCR r...

متن کامل

Microbacterium luticocti sp. nov., isolated from sewage sludge compost.

Strain SC-087B(T), isolated from sewage sludge compost during a study of bacterial diversity in composts, was characterized. The isolate was a Gram-positive, short rod that was motile, catalase- and oxidase-negative and able to grow at 27-45 degrees C, pH 5.5-9.7 and in up to 10 % NaCl. The peptidoglycan was of the B2beta type, containing the characteristic amino acids ornithine, homoserine and...

متن کامل

Microbacterium invictum sp. nov., isolated from homemade compost.

Strain DC-200T was isolated from homemade compost produced from kitchen refuse and characterized using a polyphasic approach. The isolate was a Gram-positive motile short rod, facultatively aerobic, catalase-positive and oxidase-negative, and was able to grow at 10-37 degrees C, pH 6.0-9.5 and with up to 5% of NaCl. The peptidoglycan was of the type B1 alpha and the muramic acid residues were g...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: Microorganisms

سال: 2023

ISSN: ['2076-2607']

DOI: https://doi.org/10.3390/microorganisms11071757